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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3327802_3327886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3327802 - 3327886

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CAGTCCTCATGG

Flanking Amino Acid:

TERVNLLHSQNTGLINQKKK

Intron Amino Acid Position:

1728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

75.1

0.57

0.8

69.2

31.4

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

-0.6

2.1

44.38

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454