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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3328091_3328172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328091 - 3328172

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGGCGG

5'SS Class:

major

3'SS Sequence:

CGCTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCCCACTGACC

Flanking Amino Acid:

LGRQLQAQIKDLQIELDDTQ

Intron Amino Acid Position:

1660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

47.3

48.2

Major BPS

61.3

0.28

52.7

34.2

Major PPT

65.4

0.35

0.9

57.7

33.3

Minor 5ss

25.1

-2.9

3.2

30.3

42.9

Minor BPS

46.2

-0.3

1.9

57.45

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454