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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3328617_3328886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3328617 - 3328886

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CTTCCCACAGCT

Flanking Amino Acid:

DIQAALEEAEGALEHEESKT

Intron Amino Acid Position:

1557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

75.4

0.57

0.9

68.9

37.1

Minor 5ss

-2.2

3.2

46.1

Minor BPS

47.2

-0.1

2.1

71.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454