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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3329855_3330023_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3329855 - 3330023

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GGGCACTCACCC

Flanking Amino Acid:

IQRTEELEEAKKKLAIRLQE

Intron Amino Acid Position:

1398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

64.9

0.37

29.8

Major PPT

64.1

0.32

57.1

38.6

Minor 5ss

40.5

-1.1

Minor BPS

-0.6

1.9

47.12

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454