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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3330221_3330449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3330221 - 3330449

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CGTTCATGAGCT

Flanking Amino Acid:

LKRQLEEETKSKNALAHALQ

Intron Amino Acid Position:

1333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

72.4

0.56

1.2

39.9

Major PPT

75.2

0.57

0.8

72.6

32.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

49.2

0.02

71.31

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454