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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3330569_3330989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3330569 - 3330989

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

TGTCTGAACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TCTGTCTGAACC

Flanking Amino Acid:

TQRGRLQTENGELSRLLEEK

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

58.3

46.6

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

64.3

0.32

55.3

43.8

Minor 5ss

31.2

-2.2

3.4

46.1

Minor BPS

62.4

0.37

1.6

70.43

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454