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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3332623_3333179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3332623 - 3333179

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

CTTGTCTGACCA

Flanking Amino Acid:

DKQQLEEKLKKKDFEMSQLN

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

63.7

0.34

1.2

41.8

Major PPT

0.74

0.7

76.7

25.5

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

48.9

-0

1.9

63.1

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454