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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3333855_3334223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3333855 - 3334223

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCATTGATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATTGATC

Flanking Amino Acid:

EKEKHATENKVKNLIEEMAA

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

69.4

0.44

62.3

43.4

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

61.7

0.35

1.6

68.94

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454