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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3335817_3336311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3335817 - 3336311

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTGCCATTGACT

Flanking Amino Acid:

HSQYKFGHTKVFFKAGLLGL

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.4

0.57

0.8

68.6

31.8

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

59.8

0.39

1.7

75.13

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454