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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3337694_3339261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3337694 - 3339261

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

CATGCCTCATCC

Flanking Amino Acid:

SFQTVSQLHKENLNKLMTNL

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

73.5

0.58

73.6

32.5

Major PPT

73.5

0.53

0.9

65.3

36.3

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

48.5

-0.1

1.9

59.63

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454