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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3340229_3340910_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3340229 - 3340910

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

LQACIDLIEKPLGILSILEE

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

89.5

0.89

0.6

84.3

23.8

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454