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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3341082_3341413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3341082 - 3341413

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TCCTGCTGAAGC

Flanking Amino Acid:

LDIAGFEIFDFNSFEQLCIN

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.6

29.1

Major BPS

0.42

1.1

57.3

41.7

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

39.8

-1.1

55.2

42.1

Minor BPS

-0.2

2.2

58.45

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454