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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3342213_3343054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3342213 - 3343054

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

AATTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

GCTTCCTCATGC

Flanking Amino Acid:

EEQAEADGTESADKAAYLMG

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

35.3

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

81.2

0.7

0.9

77.7

40.7

Minor 5ss

38.9

-1.2

3.7

57.4

41.7

Minor BPS

47.3

-0.2

2.1

59.17

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454