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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3343194_3343763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3343194 - 3343763

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACGTGCG

5'SS Class:

major

3'SS Sequence:

TGTCTCTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCCTGTTTATGC

Flanking Amino Acid:

DDGEELMATDHAMDILGFSN

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

62.9

41.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.6

0.67

0.8

77.3

31.4

Minor 5ss

34.4

-1.8

3.4

45.4

42.9

Minor BPS

43.7

-0.4

2.2

52.75

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454