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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3345838_3347175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3345838 - 3347175

Intron Length:

1338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GCTGACACAACC

Flanking Amino Acid:

KLATLATKTGGTLEDQIIEA

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

43.4

-0.5

53.54

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454