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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3349305_3349462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3349305 - 3349462

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

CCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCCCACTGACT

Flanking Amino Acid:

ADNAYNDMLRNRENQSMLIT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

58.7

40.6

Major BPS

61.3

0.28

52.7

34.2

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

31.8

-2.1

3.6

46.4

43.4

Minor BPS

47.5

-0.1

66.91

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454