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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3349620_3349723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3349620 - 3349723

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TTCCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

TGCGCCTCAGCC

Flanking Amino Acid:

KRRYSHWMIYTYSGLFCVTI

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

63.2

43.4

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

74.9

0.56

0.8

69.1

31.4

Minor 5ss

39.5

-1.2

3.1

50.2

39.8

Minor BPS

48.4

-0.1

1.9

59.35

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028951

3326210 - 3350077

23868

ENSAPLT00000012084

3326210 - 3352663

26454