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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3349868_3351729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3349868 - 3351729

Intron Length:

1862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CCAGCCCCAACG

Flanking Amino Acid:

KVTVETKDKQTRVVKEDEVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

33.6

Major BPS

48.9

-0

1.3

39.1

Major PPT

68.9

0.43

1.1

64.8

41.3

Minor 5ss

40.4

-1.1

2.9

48.9

41.5

Minor BPS

43.5

-0.6

44.94

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012084

3326210 - 3352663

26454