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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3363165_3363262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3363165 - 3363262

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGCCCG

5'SS Class:

major

3'SS Sequence:

TCCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCCT

U12 Branch Point Sequence:

GCTGCCTCCGCT

Flanking Amino Acid:

RTEAEPNASDVVSFAPFTLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.4

57.2

47.5

Major BPS

27.7

-1.4

4.1

56.9

40.5

Major PPT

78.7

0.65

0.7

72.7

25.4

Minor 5ss

39.6

-1.2

48.4

40.7

Minor BPS

35.3

-1

3.6

60.65

48.5

Associated Gene:

Gene:

GSS

Ensembl Gene ID:

ENSAPLG00000015589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028576

3362995 - 3369155

6161

ENSAPLT00000016256

3362995 - 3369839

6845