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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3367267_3367445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3367267 - 3367445

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TCCTCCCTGATG

Flanking Amino Acid:

TFAGLYSLDVGEEGDKIAAT

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

79.1

0.66

0.9

73.4

37.1

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

53.6

-0

1.8

58.85

43.5

Associated Gene:

Gene:

GSS

Ensembl Gene ID:

ENSAPLG00000015589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028576

3362995 - 3369155

6161

ENSAPLT00000016256

3362995 - 3369839

6845