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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3367528_3367725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3367528 - 3367725

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATCCTGTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

AGATCCTGACCT

Flanking Amino Acid:

FVLKPQREGGGNNLYGEELR

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

68.9

0.47

59.2

39.1

Major PPT

67.3

0.39

64.8

40.7

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

57.2

0.31

1.8

73.5

42.6

Associated Gene:

Gene:

GSS

Ensembl Gene ID:

ENSAPLG00000015589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028576

3362995 - 3369155

6161

ENSAPLT00000016256

3362995 - 3369839

6845