Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_3375011_3375131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3375011 - 3375131

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

GTCCCCATGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTGTCCCCATGG

Flanking Amino Acid:

AATPMKPGSATFPFFGVVPA

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.9

36.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

63.4

0.3

58.3

37.1

Minor 5ss

35.8

-1.6

2.9

53.8

42.8

Minor BPS

41.5

-0.7

2.3

52.21

47.9

Associated Gene:

Gene:

ACSS2

Ensembl Gene ID:

ENSAPLG00000015932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023811

3370129 - 3401122

30994

ENSAPLT00000016650

3371455 - 3401122

29668

ENSAPLT00000043150

3370129 - 3401122

30994