Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_3377361_3377502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3377361 - 3377502

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

AGCTCGCTGACA

Flanking Amino Acid:

YTSGSTGKPKGVLHTVGGYM

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.56

0.7

24.7

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

45.4

-0.3

2.3

58.23

41.1

Associated Gene:

Gene:

ACSS2

Ensembl Gene ID:

ENSAPLG00000015932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023811

3370129 - 3401122

30994

ENSAPLT00000016650

3371455 - 3401122

29668

ENSAPLT00000043150

3370129 - 3401122

30994