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Intron Name: Anas_platyrhynchos_platyrhynchos_21_339170_339655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

339170 - 339655

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

PFFTRRLTQETPSLGDEDCG

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

SLC9A8

Ensembl Gene ID:

ENSAPLG00000014727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039498

339022 - 365130

26109