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Intron Name: Anas_platyrhynchos_platyrhynchos_21_341085_341385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

341085 - 341385

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTGATT

Flanking Amino Acid:

PKMMFIMWFSGLRGAIPYAL

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

74.4

0.55

75.4

27.1

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

69.5

0.69

1.6

84.15

36.9

Associated Gene:

Gene:

SLC9A8

Ensembl Gene ID:

ENSAPLG00000014727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039498

339022 - 365130

26109

ENSAPLT00000015414

337216 - 365130

27915