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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3416642_3416952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3416642 - 3416952

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GGTGGCTCACCG

Flanking Amino Acid:

VDNFSQKICQLKEDHQKALL

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

52.1

0.05

1.3

41.8

Major PPT

71.7

0.49

0.8

65.2

30.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

40.4

-0.8

2.2

44.89

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031378

3412281 - 3419848

7568