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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3417079_3417242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3417079 - 3417242

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGAGC

5'SS Class:

major

3'SS Sequence:

CGTGCCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

GGGCACCCACCC

Flanking Amino Acid:

PDENDSYATEMKELQLVLSE

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

73.5

0.53

0.9

65.6

Minor 5ss

31.5

-2.1

3.3

43.1

44.1

Minor BPS

35.5

-1.1

1.9

39.98

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031378

3412281 - 3419848

7568