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Intron Name: Anas_platyrhynchos_platyrhynchos_21_343325_344899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

343325 - 344899

Intron Length:

1575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

AATTCTTTATTT

Flanking Amino Acid:

QTLRTVAFMCETCVFAFLGL

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

0.79

0.8

83.7

25.7

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

66.7

0.6

1.5

79.34

Associated Gene:

Gene:

SLC9A8

Ensembl Gene ID:

ENSAPLG00000014727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039498

339022 - 365130

26109

ENSAPLT00000015414

337216 - 365130

27915