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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3448509_3448906_F

Intron Information:

Intron Rank:

126608

Intron Class:

major

Intron Phase:

Intron Coordinates:

3448509 - 3448906

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

GGTGCATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTCTGGTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

67.6

0.4

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

-0.6

2.5

60.81

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028208

3438911 - 3449174

10264

ENSAPLT00000021680

3448325 - 3449074

750