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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3448509_3465962_F

Intron Information:

Intron Rank:

126615

Intron Class:

major

Intron Phase:

Intron Coordinates:

3448509 - 3465962

Intron Length:

17454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCTGTTTAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.2

0.68

0.8

37.9

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

54.2

0.13

1.8

65.59

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035540

3448325 - 3467731

19407