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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3470214_3472333_F

Intron Information:

Intron Rank:

126610

Intron Class:

major

Intron Phase:

Intron Coordinates:

3470214 - 3472333

Intron Length:

2120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTATG

5'SS Class:

major

3'SS Sequence:

TCTTCAATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTCTTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

74.4

41.9

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

81.6

0.71

0.8

78.5

33.6

Minor 5ss

-0.5

2.5

51.3

45.4

Minor BPS

77.2

0.93

1.4

92.06

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021831

3467389 - 3473034

5646