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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3505210_3527541_F

Intron Information:

Intron Rank:

140358

Intron Class:

major

Intron Phase:

Intron Coordinates:

3505210 - 3527541

Intron Length:

22332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTTTCTTTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

91.7

0.94

0.6

84.6

30.3

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024965

3504808 - 3533549

28742