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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3512530_3512819_R

Intron Information:

Intron Rank:

132590

Intron Class:

major

Intron Phase:

Intron Coordinates:

3512530 - 3512819

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGGAAC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

AGGTTCAAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

74.2

36.1

Major BPS

68.1

0.45

73.5

28.6

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

28.9

-2.4

2.9

34.2

41.6

Minor BPS

44.9

-0.3

1.9

61.01

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040947

3511904 - 3513391

1488