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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3751270_3755615_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3751270 - 3755615

Intron Length:

4346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTCAGCAGT

5'SS Class:

weak_major

3'SS Sequence:

TACATCTGCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

CAGTCTTTGATA

Flanking Amino Acid:

CIQAPYSLSNLSCIGAPPLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.4

58.3

46.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

62.4

0.28

57.2

38.3

Minor 5ss

39.1

-1.2

55.6

42.6

Minor BPS

61.8

0.37

1.2

62.11

38.9

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018022

3751134 - 3812746

61613