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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3880903_3883252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3880903 - 3883252

Intron Length:

2350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

AATCTTTCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

EELVVQTEEDVPGPVPLESI

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

84.4

29.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.9

0.58

0.8

70.6

35.1

Minor 5ss

42.3

-0.8

2.9

45.5

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042124

3702064 - 4028695

326632

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000002824

3702064 - 4028695

326632