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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3937147_3945867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3937147 - 3945867

Intron Length:

8721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

YFQALSKANGETKINCVRLA

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

68.8

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

34.2

-1.8

3.1

38.1

40.6

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002824

3702064 - 4028695

326632