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Intron Name: Anas_platyrhynchos_platyrhynchos_21_3945905_3960950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3945905 - 3960950

Intron Length:

15046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTATCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATCT

Flanking Amino Acid:

KINCVRLATKGASTQNSNAV

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.3

44.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.4

0.57

79.2

Minor 5ss

-2.2

3.3

40.6

45.6

Minor BPS

60.7

0.41

1.6

74.38

43.4

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002824

3702064 - 4028695

326632