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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4007280_4009540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4007280 - 4009540

Intron Length:

2261

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTCATGGA

5'SS Class:

major

3'SS Sequence:

ACTCTCTCTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TTGGCATTAAAT

Flanking Amino Acid:

DYINANYIDVRCPFVFSVAP

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

58.7

42.7

Major BPS

73.5

0.58

79.3

29.4

Major PPT

68.3

0.41

68.2

31.6

Minor 5ss

16.4

-3.9

3.6

36.8

Minor BPS

0.39

1.8

78.5

43.3

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042124

3702064 - 4028695

326632

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000002824

3702064 - 4028695

326632