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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4009668_4010190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4009668 - 4010190

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

GCCTCCTCACCA

Flanking Amino Acid:

MVTNLVEVGRPQLHSVGHRW

Intron Amino Acid Position:

941

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

78.7

37.2

Major BPS

58.2

0.2

1.1

49.1

Major PPT

66.8

0.38

0.9

58.7

37.1

Minor 5ss

35.4

-1.7

3.2

40.3

45.6

Minor BPS

50.1

1.9

60.01

45.8

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002824

3702064 - 4028695

326632