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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4009668_4011433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4009668 - 4011433

Intron Length:

1766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TTCCTCTCAACG

Flanking Amino Acid:

MVTNLVEVGRVKCVRYWPDD

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

78.7

37.2

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

71.5

0.48

0.9

64.9

36.4

Minor 5ss

35.4

-1.7

3.2

40.3

45.6

Minor BPS

59.4

0.16

1.7

64.73

43.1

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000042124

3702064 - 4028695

326632