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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4010236_4011433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4010236 - 4011433

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

TCCCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TTCCTCTCAACG

Flanking Amino Acid:

VGHRWARSPCVKCVRYWPDD

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

64.5

41.4

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

71.5

0.48

0.9

64.9

36.4

Minor 5ss

41.7

-0.9

2.8

45.2

Minor BPS

59.4

0.16

1.7

64.73

43.1

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002824

3702064 - 4028695

326632