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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4012978_4015757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4012978 - 4015757

Intron Length:

2780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAC

U12 Branch Point Sequence:

CAGGCCCTCACT

Flanking Amino Acid:

GLLGPIVVHCSAGAGRTGCF

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.7

35.4

Major BPS

63.2

0.33

1.2

65.7

Major PPT

88.5

0.87

0.6

88.4

21.3

Minor 5ss

47.1

-0.3

2.6

65.5

45.8

Minor BPS

45.5

-0.2

2.2

61.33

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000002824

3702064 - 4028695

326632

ENSAPLT00000042124

3702064 - 4028695

326632