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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4015894_4016905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4015894 - 4016905

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AATATTTTATCC

Flanking Amino Acid:

SQRVNLVQTEEQYVFVHDAI

Intron Amino Acid Position:

1078

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.4

0.53

0.9

67.4

32.5

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

53.1

0.08

1.6

62.17

37.1

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002824

3702064 - 4028695

326632

ENSAPLT00000042124

3702064 - 4028695

326632

ENSAPLT00000041927

3702064 - 4028695

326632