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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4020228_4022403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4020228 - 4022403

Intron Length:

2176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

ATTCTTTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACT

Flanking Amino Acid:

SNYINAALMDSHKQPAAFIV

Intron Amino Acid Position:

1186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

69.1

41.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

76.4

0.59

0.9

77.6

36.1

Minor 5ss

42.2

-0.9

2.9

56.7

Minor BPS

88.9

1.3

0.8

99.22

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042124

3702064 - 4028695

326632

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000002824

3702064 - 4028695

326632