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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4027944_4028641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4027944 - 4028641

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

GCGTCACTGACT

Flanking Amino Acid:

NNKSNMVESLEQYKFVYEVA

Intron Amino Acid Position:

1372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

48.2

-0

66.02

44.3

Associated Gene:

Gene:

PTPRT

Ensembl Gene ID:

ENSAPLG00000002683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042124

3702064 - 4028695

326632

ENSAPLT00000041927

3702064 - 4028695

326632

ENSAPLT00000002824

3702064 - 4028695

326632