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Intron Name: Anas_platyrhynchos_platyrhynchos_21_407751_408569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

407751 - 408569

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAA

U12 Branch Point Sequence:

CTTCCCTTGAAG

Flanking Amino Acid:

LQFAFYVVEQAGNQPFNRAM

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

62.3

0.31

1.1

54.9

40.8

Major PPT

75.9

0.58

0.7

31.5

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

62.1

0.24

1.6

65.48

42.2

Associated Gene:

Gene:

B4GALT5

Ensembl Gene ID:

ENSAPLG00000015618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016285

398367 - 411629

13263