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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4079830_4090257_F

Intron Information:

Intron Rank:

133547

Intron Class:

major

Intron Phase:

Intron Coordinates:

4079830 - 4090257

Intron Length:

10428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

ACCTCTGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

62.2

0.3

1.2

38.7

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

54.6

0.14

64.77

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039063

4068231 - 4132172

63942

ENSAPLT00000017653

4068231 - 4113603

45373