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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4283367_4284359_R

Intron Information:

Intron Rank:

148380

Intron Class:

major

Intron Phase:

Intron Coordinates:

4283367 - 4284359

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

TGTTCAGAGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

80.8

0.69

0.8

73.3

37.2

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

38.6

-0.9

2.6

55.96

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019144

4272534 - 4284450

11917