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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4368325_4368980_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4368325 - 4368980

Intron Length:
656

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTATGTAAC

5'SS Class:
strong_major

3'SS Sequence:
CTCCTCACACCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAT

U12 Branch Point Sequence:
GCCTCCTCACAC

Flanking Amino Acid:
LEKYGPIRPLPQTPHLEEDL

Intron Amino Acid Position:
556

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
0.9
75.8
33.3

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
67.2
0.39
0.9
59.6
35.5

Minor 5ss
42.3
-0.9
2.5
50.7
40.4

Minor BPS
45.9
-0.3
1.9
52.41
44.6

Associated Gene:

Gene:
MYBL2

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4365082 - 4378221
13140

4363782 - 4378221
14440

4363782 - 4378221
14440