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Intron Name: Anas_platyrhynchos_platyrhynchos_21_4386115_4386644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4386115 - 4386644

Intron Length:

530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

GATGCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TGATGTTCAACT

Flanking Amino Acid:

KTRLAEITNKCTDDDLEFYI

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

40.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

73.3

0.52

0.9

41.1

Minor 5ss

41.2

-1

2.9

53.3

43.9

Minor BPS

53.7

0.19

73.89

42.8

Associated Gene:

Gene:

IFT52

Ensembl Gene ID:

ENSAPLG00000005680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005906

4384335 - 4396518

12184